Coding
Part:BBa_K4361319
Designed by: Lars van den Biggelaar Group: iGEM22_TUDelft (2022-10-03)
BlcR L38V
A mutant of the BlcR protein, created through site-directed mutagenesis with primers R1 (Part:BBa_K4361200) and F1.3 L38V (Part:BBa_K4361203). For this mutant, the leucine in position 38 has been changed to valine by mutating the TTG codon to GTG.
This mutant also contains the following nucleotide mutations outside of the targeted site:
- G 9 > T, resulting in substitution Q3H
- G 148 > T, resulting in a possible stop codon in position 50
- G 156 > C, silent mutation
- CGCG 198-201 > ATAT, resulting in substitution A67Y
- A 364 > T, resulting in substitution T122S
Sequencing data only contained this part's sequence up until and including nucleotide 399. All nucleotides after are presumed to be identical to those found in the original codon optimized BlcR, Part:BBa_K4361100.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 694
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 78
- 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 589
Experimental results
The set of BlcR mutants (Part:BBa_K4361300 through this part) were expressed in a PURE system in the presence of GreenLys (fluorescent Cy2-labeled lysine). Samples were then run on an SDS PAGE gel (Figure 1.) to determine whether the protein was produced. For this mutant (lane 20), a protein band corresponding to the BlcR monomer is visible. Concluding that the production in an E. coli cell-free system was successful for this mutant.
[edit]
Categories
Parameters
None |